Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ighv1-42A0A0A6YY38 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ighv1-42A0A0A6YY38 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-42A0A0A6YY38 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-42A0A0A6YY38 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ighv1-42A0A0A6YY38 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-42A0A0A6YY38 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-42A0A0A6YY38 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ighv1-42A0A0A6YY38 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.61■□□□□ 0.89
Ighv1-42A0A0A6YY38 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-42A0A0A6YY38 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-42A0A0A6YY38 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv1-42A0A0A6YY38 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.6■□□□□ 0.89
Ighv1-42A0A0A6YY38 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Ighv1-42A0A0A6YY38 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ighv1-42A0A0A6YY38 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-42A0A0A6YY38 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-42A0A0A6YY38 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-42A0A0A6YY38 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ighv1-42A0A0A6YY38 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-42A0A0A6YY38 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-42A0A0A6YY38 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-42A0A0A6YY38 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-42A0A0A6YY38 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 Gm15820-201ENSMUST00000201566 728 ntBASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-42A0A0A6YY38 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-42A0A0A6YY38 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.56■□□□□ 0.88
Ighv1-42A0A0A6YY38 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-42A0A0A6YY38 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-42A0A0A6YY38 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.56■□□□□ 0.88
Ighv1-42A0A0A6YY38 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-42A0A0A6YY38 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-42A0A0A6YY38 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-42A0A0A6YY38 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ighv1-42A0A0A6YY38 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-42A0A0A6YY38 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-42A0A0A6YY38 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Gm22567-201ENSMUST00000175542 342 ntBASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-42A0A0A6YY38 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-42A0A0A6YY38 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-42A0A0A6YY38 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-42A0A0A6YY38 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-42A0A0A6YY38 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv1-42A0A0A6YY38 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ighv1-42A0A0A6YY38 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ighv1-42A0A0A6YY38 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv1-42A0A0A6YY38 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-42A0A0A6YY38 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-42A0A0A6YY38 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ighv1-42A0A0A6YY38 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-42A0A0A6YY38 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-42A0A0A6YY38 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-42A0A0A6YY38 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms