Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Gm6311-201ENSMUST00000073790 878 ntBASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-18A0A0A6YXN4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Ighv1-18A0A0A6YXN4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ighv1-18A0A0A6YXN4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.83■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-18A0A0A6YXN4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.77■□□□□ 0.44
Ighv1-18A0A0A6YXN4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-18A0A0A6YXN4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms