Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.54■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Etf1-202ENSMUST00000180351 108 ntBASIC18.52■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv3-4A0A0A6YXF1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.51■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.5■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv3-4A0A0A6YXF1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ighv3-4A0A0A6YXF1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.48■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv3-4A0A0A6YXF1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv3-4A0A0A6YXF1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ighv3-4A0A0A6YXF1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.38■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv3-4A0A0A6YXF1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms