Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gm5786-201ENSMUST00000085368 882 ntBASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm7332-201ENSMUST00000118351 454 ntBASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-52A0A0A6YXC3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.76■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-52A0A0A6YXC3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Cap2-205ENSMUST00000225824 1634 ntBASIC16.74■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.72■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ighv1-52A0A0A6YXC3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ighv1-52A0A0A6YXC3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms