Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv3-3A0A0A6YWL2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Mir3960-201ENSMUST00000198213 73 ntBASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm22567-201ENSMUST00000175542 342 ntBASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv3-3A0A0A6YWL2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Gm11599-201ENSMUST00000118720 878 ntBASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Terc-201ENSMUST00000082862 423 ntBASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Gm45364-201ENSMUST00000210883 159 ntBASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.11■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv3-3A0A0A6YWL2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms