Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28557A0A087WQQ0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28557A0A087WQQ0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28557A0A087WQQ0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Gm28557A0A087WQQ0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28557A0A087WQQ0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm28557A0A087WQQ0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm28557A0A087WQQ0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Gm28557A0A087WQQ0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28557A0A087WQQ0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Gm28557A0A087WQQ0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm28557A0A087WQQ0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Gm28557A0A087WQQ0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28557A0A087WQQ0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28557A0A087WQQ0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28557A0A087WQQ0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.8■□□□□ 0.76
Gm28557A0A087WQQ0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28557A0A087WQQ0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28557A0A087WQQ0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.8■□□□□ 0.76
Gm28557A0A087WQQ0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28557A0A087WQQ0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28557A0A087WQQ0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28557A0A087WQQ0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28557A0A087WQQ0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm28557A0A087WQQ0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Gm28557A0A087WQQ0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28557A0A087WQQ0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28557A0A087WQQ0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28557A0A087WQQ0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28557A0A087WQQ0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28557A0A087WQQ0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28557A0A087WQQ0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28557A0A087WQQ0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28557A0A087WQQ0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.73■□□□□ 0.75
Gm28557A0A087WQQ0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm28557A0A087WQQ0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.72■□□□□ 0.75
Gm28557A0A087WQQ0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm28557A0A087WQQ0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms