Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-2A0A075B638 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-2A0A075B638 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-2A0A075B638 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-2A0A075B638 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-2A0A075B638 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-2A0A075B638 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-2A0A075B638 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-2A0A075B638 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav4-2A0A075B638 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Gm37136-201ENSMUST00000194368 194 ntBASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-2A0A075B638 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-2A0A075B638 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.49■□□□□ 0.39
Trav4-2A0A075B638 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav4-2A0A075B638 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-2A0A075B638 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-2A0A075B638 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-2A0A075B638 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-2A0A075B638 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav4-2A0A075B638 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav4-2A0A075B638 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav4-2A0A075B638 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav4-2A0A075B638 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav4-2A0A075B638 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav4-2A0A075B638 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-2A0A075B638 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Gm22567-201ENSMUST00000175542 342 ntBASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-2A0A075B638 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-2A0A075B638 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-2A0A075B638 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-2A0A075B638 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav4-2A0A075B638 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Trav4-2A0A075B638 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-2A0A075B638 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-2A0A075B638 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-2A0A075B638 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav4-2A0A075B638 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms