Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16nA0A075B634 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trav16nA0A075B634 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16nA0A075B634 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16nA0A075B634 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav16nA0A075B634 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16nA0A075B634 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav16nA0A075B634 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Gm37136-201ENSMUST00000194368 194 ntBASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16nA0A075B634 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16nA0A075B634 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16nA0A075B634 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav16nA0A075B634 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16nA0A075B634 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16nA0A075B634 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16nA0A075B634 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16nA0A075B634 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav16nA0A075B634 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav16nA0A075B634 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16nA0A075B634 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16nA0A075B634 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16nA0A075B634 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav16nA0A075B634 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16nA0A075B634 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16nA0A075B634 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.55■□□□□ 0.24
Trav16nA0A075B634 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16nA0A075B634 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms