Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7n-5A0A075B604 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7n-5A0A075B604 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7n-5A0A075B604 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7n-5A0A075B604 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7n-5A0A075B604 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7n-5A0A075B604 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav7n-5A0A075B604 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Trav7n-5A0A075B604 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7n-5A0A075B604 Gm10420-201ENSMUST00000121713 882 ntBASIC18.14■□□□□ 0.49
Trav7n-5A0A075B604 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7n-5A0A075B604 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7n-5A0A075B604 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7n-5A0A075B604 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7n-5A0A075B604 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav7n-5A0A075B604 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7n-5A0A075B604 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7n-5A0A075B604 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7n-5A0A075B604 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7n-5A0A075B604 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7n-5A0A075B604 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7n-5A0A075B604 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.08■□□□□ 0.49
Trav7n-5A0A075B604 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7n-5A0A075B604 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7n-5A0A075B604 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7n-5A0A075B604 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7n-5A0A075B604 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7n-5A0A075B604 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7n-5A0A075B604 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7n-5A0A075B604 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7n-5A0A075B604 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7n-5A0A075B604 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav7n-5A0A075B604 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-5A0A075B604 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.04■□□□□ 0.48
Trav7n-5A0A075B604 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-5A0A075B604 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-5A0A075B604 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-5A0A075B604 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-5A0A075B604 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav7n-5A0A075B604 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav7n-5A0A075B604 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Trav7n-5A0A075B604 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms