Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Mir125a-201ENSMUST00000083545 68 ntBASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcb1Q9Z0H3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcb1Q9Z0H3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcb1Q9Z0H3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smarcb1Q9Z0H3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Smarcb1Q9Z0H3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Gm15487-201ENSMUST00000122373 465 ntBASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smarcb1Q9Z0H3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Gm24694-201ENSMUST00000180054 110 ntBASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Gm27663-201ENSMUST00000184839 110 ntBASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Gm7730-201ENSMUST00000212486 454 ntBASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms