Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdzd4Q9QY39 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdzd4Q9QY39 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdzd4Q9QY39 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Carlr-201ENSMUST00000181515 2574 ntBASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdzd4Q9QY39 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms