Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm29310-201ENSMUST00000185468 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21825-201ENSMUST00000185728 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm29109-201ENSMUST00000185895 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21896-201ENSMUST00000186520 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21873-201ENSMUST00000186728 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21794-201ENSMUST00000187056 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21880-201ENSMUST00000187275 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21826-201ENSMUST00000187451 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21198-201ENSMUST00000188393 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21749-201ENSMUST00000189343 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21901-201ENSMUST00000189568 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm29424-201ENSMUST00000189716 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm28599-201ENSMUST00000189838 694 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21867-201ENSMUST00000189917 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm29269-201ENSMUST00000190087 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21722-201ENSMUST00000190153 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm28423-201ENSMUST00000190701 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21899-201ENSMUST00000190745 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21910-201ENSMUST00000191163 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21849-201ENSMUST00000191571 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm28678-201ENSMUST00000191593 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm20910-201ENSMUST00000193268 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm21871-201ENSMUST00000194621 696 ntBASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.01□□□□□ -0.17
Upk3aQ9JKX8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3aQ9JKX8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms