Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Gm17420-201ENSMUST00000164753 153 ntBASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Gm27772-201ENSMUST00000184900 187 ntBASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm11425-201ENSMUST00000119608 498 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm14660-201ENSMUST00000119809 575 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm8062-201ENSMUST00000139696 444 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm9396-201ENSMUST00000076703 567 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1fQ9JIS7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Mir1938-201ENSMUST00000158746 100 ntBASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cacna1fQ9JIS7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Gm23931-201ENSMUST00000103842 109 ntBASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1fQ9JIS7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1fQ9JIS7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.29■□□□□ 0.2
Cacna1fQ9JIS7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1fQ9JIS7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms