Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.36□□□□□ -0.11
OtofQ9ESF1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.36□□□□□ -0.11
OtofQ9ESF1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm14928-201ENSMUST00000120198 477 ntBASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.36□□□□□ -0.11
OtofQ9ESF1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OtofQ9ESF1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.34□□□□□ -0.11
OtofQ9ESF1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Gm12585-201ENSMUST00000117307 290 ntBASIC14.34□□□□□ -0.11
OtofQ9ESF1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OtofQ9ESF1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OtofQ9ESF1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Gm23984-201ENSMUST00000157139 203 ntBASIC14.33□□□□□ -0.12
OtofQ9ESF1 Gm10766-202ENSMUST00000194123 606 ntBASIC14.33□□□□□ -0.12
OtofQ9ESF1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.33□□□□□ -0.12
OtofQ9ESF1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
OtofQ9ESF1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms