Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdc40Q9DC48 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 AA543401-201ENSMUST00000164248 1269 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Rpph1-201ENSMUST00000175096 319 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm43474-201ENSMUST00000196415 774 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm20553-201ENSMUST00000204205 844 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Cdc40Q9DC48 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.53□□□□□ -0.24
Cdc40Q9DC48 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdc40Q9DC48 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Cdc40Q9DC48 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms