Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Rprl2-201ENSMUST00000157150 290 ntBASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp2aQ9DB34 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Chchd1-203ENSMUST00000224633 557 ntBASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp2aQ9DB34 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp2aQ9DB34 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Chmp2aQ9DB34 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Chmp2aQ9DB34 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp2aQ9DB34 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp2aQ9DB34 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Gm44335-201ENSMUST00000196879 141 ntBASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Gm44297-201ENSMUST00000198304 141 ntBASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Gm44346-201ENSMUST00000198851 141 ntBASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp2aQ9DB34 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp2aQ9DB34 Gm13464-201ENSMUST00000119418 935 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms