Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rsph9Q9D9V4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rsph9Q9D9V4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm8410-201ENSMUST00000117225 605 ntBASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm5479-201ENSMUST00000160578 435 ntBASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rsph9Q9D9V4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Gm18766-201ENSMUST00000189811 808 ntBASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.28□□□□□ -0.12
Rsph9Q9D9V4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms