Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chaf1bQ9D0N7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Gm27704-201ENSMUST00000185094 107 ntBASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Gm6296-201ENSMUST00000222599 943 ntBASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Chaf1bQ9D0N7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chaf1bQ9D0N7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms