Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.29■□□□□ 0.04
Thumpd2Q9CZB3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd2Q9CZB3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd2Q9CZB3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd2Q9CZB3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm44771-201ENSMUST00000206975 626 ntBASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd2Q9CZB3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd2Q9CZB3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd2Q9CZB3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd2Q9CZB3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms