Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Gm12497-201ENSMUST00000138778 237 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Gm28659-201ENSMUST00000188013 759 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Gm6443-201ENSMUST00000203599 874 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Gm8655-201ENSMUST00000221159 852 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Gm5867-201ENSMUST00000063197 592 ntBASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube2fQ9CY34 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube2fQ9CY34 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube2fQ9CY34 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ube2fQ9CY34 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms