Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.99□□□□□ -0.17
Khdc3Q9CWU5 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gm9385-201ENSMUST00000117563 472 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gm16026-204ENSMUST00000162652 683 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gm44492-201ENSMUST00000197012 141 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 AW822252-206ENSMUST00000208904 237 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Khdc3Q9CWU5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Khdc3Q9CWU5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Gm13464-201ENSMUST00000119418 935 ntBASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.96□□□□□ -0.17
Khdc3Q9CWU5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms