Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Gm27618-201ENSMUST00000183671 60 ntBASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Gm37230-201ENSMUST00000194491 818 ntBASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Otud1Q9CUB6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm8410-201ENSMUST00000117225 605 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm13823-201ENSMUST00000119930 345 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm15693-201ENSMUST00000120470 637 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm27430-201ENSMUST00000184585 107 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm44333-201ENSMUST00000197168 107 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Otud1Q9CUB6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Otud1Q9CUB6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm6754-201ENSMUST00000117124 913 ntBASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm13223-201ENSMUST00000118609 747 ntBASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms