Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nipsnap3bQ9CQE1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm10060-201ENSMUST00000212002 111 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 AV026068-213ENSMUST00000223675 1171 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Nipsnap3bQ9CQE1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Mir8098-201ENSMUST00000184011 137 ntBASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm5864-201ENSMUST00000202263 970 ntBASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nipsnap3bQ9CQE1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nipsnap3bQ9CQE1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms