Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.11□□□□□ -0.31
Raf1Q99N57 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gm9727-201ENSMUST00000161387 555 ntBASIC13.11□□□□□ -0.31
Raf1Q99N57 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.11□□□□□ -0.31
Raf1Q99N57 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.11□□□□□ -0.31
Raf1Q99N57 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.11□□□□□ -0.31
Raf1Q99N57 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raf1Q99N57 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raf1Q99N57 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.1□□□□□ -0.31
Raf1Q99N57 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Gm10576-201ENSMUST00000191927 825 ntBASIC13.1□□□□□ -0.31
Raf1Q99N57 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.1□□□□□ -0.31
Raf1Q99N57 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Grk6-207ENSMUST00000225925 2769 ntBASIC13.1□□□□□ -0.31
Raf1Q99N57 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.1□□□□□ -0.31
Raf1Q99N57 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raf1Q99N57 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Raf1Q99N57 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.09□□□□□ -0.31
Raf1Q99N57 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Carlr-201ENSMUST00000181515 2574 ntBASIC13.09□□□□□ -0.31
Raf1Q99N57 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raf1Q99N57 Gm8097-201ENSMUST00000117903 829 ntBASIC13.09□□□□□ -0.31
Raf1Q99N57 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms