Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.07■□□□□ 0
Col25a1Q99MQ5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col25a1Q99MQ5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Mir433-201ENSMUST00000093564 124 ntBASIC15.06■□□□□ 0
Col25a1Q99MQ5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.06■□□□□ 0
Col25a1Q99MQ5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col25a1Q99MQ5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col25a1Q99MQ5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.05■□□□□ 0
Col25a1Q99MQ5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Col25a1Q99MQ5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col25a1Q99MQ5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col25a1Q99MQ5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm23931-201ENSMUST00000103842 109 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm12341-201ENSMUST00000119724 503 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm24514-201ENSMUST00000174961 285 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm5161-201ENSMUST00000075243 853 ntBASIC15.05■□□□□ -0
Col25a1Q99MQ5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Col25a1Q99MQ5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Gm29787-201ENSMUST00000222129 849 ntBASIC15.04■□□□□ -0
Col25a1Q99MQ5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col25a1Q99MQ5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms