Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm16026-204ENSMUST00000162652 683 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm18766-201ENSMUST00000189811 808 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm43433-201ENSMUST00000196573 481 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm6218-201ENSMUST00000219812 628 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Gm25857-201ENSMUST00000082788 129 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.79□□□□□ -0.36
Scrt1Q99M85 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scrt1Q99M85 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scrt1Q99M85 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Gm7775-201ENSMUST00000218871 853 ntBASIC12.78□□□□□ -0.36
Scrt1Q99M85 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.78□□□□□ -0.36
Scrt1Q99M85 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scrt1Q99M85 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.77□□□□□ -0.36
Scrt1Q99M85 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scrt1Q99M85 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm25144-201ENSMUST00000179561 110 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm25352-201ENSMUST00000179815 110 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm18049-201ENSMUST00000208909 581 ntBASIC12.77□□□□□ -0.37
Scrt1Q99M85 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Scrt1Q99M85 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms