Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp1b1Q99LU0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Efs-202ENSMUST00000227037 2540 ntBASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Gm2213-201ENSMUST00000197485 688 ntBASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp1b1Q99LU0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Gm12008-201ENSMUST00000117791 755 ntBASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.78□□□□□ -0.2
Chmp1b1Q99LU0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp1b1Q99LU0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp1b1Q99LU0 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms