Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Gm4984-201ENSMUST00000115987 360 ntBASIC15.28■□□□□ 0.04
Clp1Q99LI9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.28■□□□□ 0.04
Clp1Q99LI9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clp1Q99LI9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm27892-201ENSMUST00000185017 106 ntBASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Gm21470-201ENSMUST00000187680 696 ntBASIC15.27■□□□□ 0.04
Clp1Q99LI9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clp1Q99LI9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.27■□□□□ 0.03
Clp1Q99LI9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clp1Q99LI9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Gm4804-201ENSMUST00000182234 999 ntBASIC15.26■□□□□ 0.03
Clp1Q99LI9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.26■□□□□ 0.03
Clp1Q99LI9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clp1Q99LI9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm12882-201ENSMUST00000121696 517 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms