Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vmp1Q99KU0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Mir3113-201ENSMUST00000175478 76 ntBASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vmp1Q99KU0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm2213-201ENSMUST00000197485 688 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.06□□□□□ -0.16
Vmp1Q99KU0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Gm11594-201ENSMUST00000122313 162 ntBASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms