Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gm6376-201ENSMUST00000209407 580 ntBASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gm6296-201ENSMUST00000222599 943 ntBASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb3Q91XZ7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Gm25406-201ENSMUST00000157599 105 ntBASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb3Q91XZ7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm7862-201ENSMUST00000121461 292 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm12497-201ENSMUST00000138778 237 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44357-201ENSMUST00000195897 142 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm19658-201ENSMUST00000196231 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44367-201ENSMUST00000196836 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44350-201ENSMUST00000197197 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44390-201ENSMUST00000197533 144 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44313-201ENSMUST00000198018 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44486-201ENSMUST00000198508 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44314-201ENSMUST00000199263 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44394-201ENSMUST00000199558 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44484-201ENSMUST00000199873 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44466-201ENSMUST00000200264 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm44359-201ENSMUST00000200671 138 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm18363-201ENSMUST00000221671 730 ntBASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb3Q91XZ7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms