Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Mir5126-201ENSMUST00000175513 77 ntBASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm27300-201ENSMUST00000184085 97 ntBASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm27335-201ENSMUST00000184758 97 ntBASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb4Q91XZ6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdhb4Q91XZ6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms