Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr1Q8VHP6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr1Q8VHP6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr1Q8VHP6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdhr1Q8VHP6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gm27437-201ENSMUST00000183429 107 ntBASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gm27533-201ENSMUST00000183800 152 ntBASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdhr1Q8VHP6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gm9719-201ENSMUST00000162765 543 ntBASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Mir7684-201ENSMUST00000183858 60 ntBASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdhr1Q8VHP6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Gm44344-201ENSMUST00000200287 129 ntBASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr1Q8VHP6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms