Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Gm14859-201ENSMUST00000117752 357 ntBASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpa1Q8VEE4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rpa1Q8VEE4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Gm27704-201ENSMUST00000185094 107 ntBASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rpa1Q8VEE4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm27742-201ENSMUST00000184667 60 ntBASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.69□□□□□ -0.06
Rpa1Q8VEE4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms