Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Q8VDP2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.26□□□□□ -0.13
Q8VDP2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.26□□□□□ -0.13
Q8VDP2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.26□□□□□ -0.13
Q8VDP2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Gm10517-202ENSMUST00000192970 758 ntBASIC14.26□□□□□ -0.13
Q8VDP2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.26□□□□□ -0.13
Q8VDP2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Q8VDP2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q8VDP2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Q8VDP2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Gm7889-201ENSMUST00000185591 958 ntBASIC14.25□□□□□ -0.13
Q8VDP2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.25□□□□□ -0.13
Q8VDP2 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.25□□□□□ -0.13
Q8VDP2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.25□□□□□ -0.13
Q8VDP2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.25□□□□□ -0.13
Q8VDP2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q8VDP2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.24□□□□□ -0.13
Q8VDP2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
Q8VDP2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q8VDP2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q8VDP2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.24□□□□□ -0.13
Q8VDP2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.24□□□□□ -0.13
Q8VDP2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.24□□□□□ -0.13
Q8VDP2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Q8VDP2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q8VDP2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q8VDP2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.23□□□□□ -0.13
Q8VDP2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.23□□□□□ -0.13
Q8VDP2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.23□□□□□ -0.13
Q8VDP2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.23□□□□□ -0.13
Q8VDP2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.23□□□□□ -0.13
Q8VDP2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q8VDP2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Q8VDP2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms