Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf8Q8VC56 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gm5364-201ENSMUST00000216789 889 ntBASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf8Q8VC56 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf8Q8VC56 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.06□□□□□ -0.16
Rnf8Q8VC56 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Gm4899-201ENSMUST00000178708 719 ntBASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms