Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Gm11780-201ENSMUST00000136880 516 ntBASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nup35Q8R4R6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Nup35Q8R4R6 Matn2-206ENSMUST00000228570 2798 ntBASIC11.9□□□□□ -0.51
Nup35Q8R4R6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Nup35Q8R4R6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gm12644-201ENSMUST00000119935 606 ntBASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gm12895-201ENSMUST00000122214 226 ntBASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gm27704-201ENSMUST00000185094 107 ntBASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nup35Q8R4R6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gm9726-201ENSMUST00000180321 678 ntBASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup35Q8R4R6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup35Q8R4R6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup35Q8R4R6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms