Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim29Q8R2Q0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim29Q8R2Q0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim29Q8R2Q0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim29Q8R2Q0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.26
Trim29Q8R2Q0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Gm15427-201ENSMUST00000117288 531 ntBASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim29Q8R2Q0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim29Q8R2Q0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Gm11779-201ENSMUST00000118541 368 ntBASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms