Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Gm27618-201ENSMUST00000183671 60 ntBASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpp40Q8R1F9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Gm25925-201ENSMUST00000158314 306 ntBASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpp40Q8R1F9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpp40Q8R1F9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Gm5566-201ENSMUST00000116118 459 ntBASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Gm9719-201ENSMUST00000162765 543 ntBASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpp40Q8R1F9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Gm6222-201ENSMUST00000120787 396 ntBASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Gm27622-201ENSMUST00000183779 60 ntBASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rpp40Q8R1F9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms