Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gm27397-201ENSMUST00000184997 107 ntBASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfwd3Q8CIK8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rfwd3Q8CIK8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfwd3Q8CIK8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Gm27494-201ENSMUST00000184735 189 ntBASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfwd3Q8CIK8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms