Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne4Q8CII8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Gm21470-201ENSMUST00000187680 696 ntBASIC16.39■□□□□ 0.21
Syne4Q8CII8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Gm17795-201ENSMUST00000214505 757 ntBASIC16.39■□□□□ 0.21
Syne4Q8CII8 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.39■□□□□ 0.21
Syne4Q8CII8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Syne4Q8CII8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gm12957-201ENSMUST00000117835 377 ntBASIC16.38■□□□□ 0.21
Syne4Q8CII8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gm6244-201ENSMUST00000178732 841 ntBASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.38■□□□□ 0.21
Syne4Q8CII8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne4Q8CII8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm12390-201ENSMUST00000117897 397 ntBASIC16.37■□□□□ 0.21
Syne4Q8CII8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm27839-201ENSMUST00000184242 106 ntBASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syne4Q8CII8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms