Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox30Q8CGW4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.91■□□□□ 0.14
Sox30Q8CGW4 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Matn2-206ENSMUST00000228570 2798 ntBASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox30Q8CGW4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Gm5479-201ENSMUST00000160578 435 ntBASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox30Q8CGW4 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.9■□□□□ 0.14
Sox30Q8CGW4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.89■□□□□ 0.14
Sox30Q8CGW4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Gm24589-201ENSMUST00000116692 94 ntBASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Gm10154-201ENSMUST00000084445 354 ntBASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox30Q8CGW4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms