Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hist3h2bbQ8CGP0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm7638-201ENSMUST00000121348 967 ntBASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hist3h2bbQ8CGP0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.01□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm14752-201ENSMUST00000120719 2075 ntBASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm14722-201ENSMUST00000118943 689 ntBASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm10313-201ENSMUST00000095320 1002 ntBASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hist3h2bbQ8CGP0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms