Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Gm14140-201ENSMUST00000119999 995 ntBASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc38Q8CDN8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc38Q8CDN8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc38Q8CDN8 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Mzt1-203ENSMUST00000227948 952 ntBASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc38Q8CDN8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Psmb5-202ENSMUST00000227257 622 ntBASIC16.18■□□□□ 0.18
Ccdc38Q8CDN8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms