Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtp1Q8C8C1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtp1Q8C8C1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtp1Q8C8C1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtp1Q8C8C1 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Gm13464-201ENSMUST00000119418 935 ntBASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Gm17794-201ENSMUST00000220252 955 ntBASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtp1Q8C8C1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gm33320-201ENSMUST00000192232 530 ntBASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtp1Q8C8C1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtp1Q8C8C1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Gm43179-201ENSMUST00000198797 275 ntBASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Gm2451-201ENSMUST00000199447 999 ntBASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Gm10290-201ENSMUST00000200451 999 ntBASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtp1Q8C8C1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms