Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Gm21362-201ENSMUST00000194272 928 ntBASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm11Q8BUV6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Gm25116-201ENSMUST00000157191 122 ntBASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm11Q8BUV6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm14859-201ENSMUST00000117752 357 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm18489-201ENSMUST00000172565 551 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm5244-202ENSMUST00000189517 743 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm45696-201ENSMUST00000212088 985 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.42□□□□□ -0.42
Lsm11Q8BUV6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm11Q8BUV6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms