Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk5rap1Q8BTW8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk5rap1Q8BTW8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk5rap1Q8BTW8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk5rap1Q8BTW8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cdk5rap1Q8BTW8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk5rap1Q8BTW8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm5566-201ENSMUST00000116118 459 ntBASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm38294-201ENSMUST00000192831 381 ntBASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk5rap1Q8BTW8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm27306-201ENSMUST00000183970 107 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm29310-201ENSMUST00000185468 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21825-201ENSMUST00000185728 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm29109-201ENSMUST00000185895 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21896-201ENSMUST00000186520 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21873-201ENSMUST00000186728 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21794-201ENSMUST00000187056 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21880-201ENSMUST00000187275 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21826-201ENSMUST00000187451 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21198-201ENSMUST00000188393 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21749-201ENSMUST00000189343 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21901-201ENSMUST00000189568 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm29424-201ENSMUST00000189716 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm28599-201ENSMUST00000189838 694 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21867-201ENSMUST00000189917 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm29269-201ENSMUST00000190087 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21722-201ENSMUST00000190153 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm28423-201ENSMUST00000190701 696 ntBASIC13.82□□□□□ -0.2
Cdk5rap1Q8BTW8 Gm21899-201ENSMUST00000190745 696 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms