Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab11fip4Q8BQP8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm16198-201ENSMUST00000118766 670 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm18889-201ENSMUST00000174284 929 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Rpph1-201ENSMUST00000175096 319 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm7063-201ENSMUST00000186840 981 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Gm10154-201ENSMUST00000084445 354 ntBASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab11fip4Q8BQP8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab11fip4Q8BQP8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.14■□□□□ 0.18
Rab11fip4Q8BQP8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Gm9385-201ENSMUST00000117563 472 ntBASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Gm14057-201ENSMUST00000120631 482 ntBASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rab11fip4Q8BQP8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms