Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp2bQ8BJF9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp2bQ8BJF9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Chmp2bQ8BJF9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp2bQ8BJF9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp2bQ8BJF9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp2bQ8BJF9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms