Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Slc5a7Q8BGY9 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc5a7Q8BGY9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gm7506-201ENSMUST00000207758 815 ntBASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc5a7Q8BGY9 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms