Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3bQ80YF6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Upk3bQ80YF6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk3bQ80YF6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk3bQ80YF6 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.33□□□□□ -0.43
Upk3bQ80YF6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Gm17807-201ENSMUST00000186869 298 ntBASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Gm6089-201ENSMUST00000197666 938 ntBASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3bQ80YF6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Gm7222-201ENSMUST00000117512 906 ntBASIC12.32□□□□□ -0.44
Upk3bQ80YF6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Mir7071-201ENSMUST00000184847 69 ntBASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk3bQ80YF6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms